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not able to install bioconductor packages
package
bioconductor
new version
7.2 years ago
farahqureshi5
• 0
1
vote
4
replies
1.3k
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DiifBind version difference
diffbind
new version
updated 8.9 years ago by
Rory Stark
★ 5.2k • written 9.0 years ago by
pkra
• 0
3
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2
replies
1.1k
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DESeq2: Question regarding changes between Bioconductor 3.2 and 3.4 or recent version changes
deseq2
new version
bioconductor
software error
reproducibility
7.5 years ago
Daniel Elsner
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2
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2
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1.4k
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Target version of R for Bioconductor 3.1?
new version
9.2 years ago
David Eby
▴ 30
0
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2
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3.4k
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DESeqDataSetFromMatrix Unavailable for R Version 3.5.0
DESeq2
deseqdatasetfrommatrix
r
new version
updated 5.7 years ago by
Michael Love
42k • written 5.7 years ago by
megannj
• 0
0
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1
reply
1.1k
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New Version of DexSEQ
upgrade
new version
backwards compatibility
updated 9.3 years ago by
Steve Lianoglou
★ 13k • written 9.3 years ago by
jrdemasi
• 0
1
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1
reply
1.2k
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Agilent BiomaRT getBM unavailable filter value
biomaRT
getBM
new version
updated 7.4 years ago by
James W. MacDonald
65k • written 7.4 years ago by
u.seemab
• 0
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Answer: normalization using Deseq2
by
ATpoint
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counts(dds, normalized=TRUE)
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Hi Michael, I have tried what you suggested. I started with methylation loci. I created segment1 and segment2 but how to combine them bec…
Comment: EGSEA usage with microarray data (with vooma)?
by
Chris
• 0
Hi Pekka, I also try EGSEA with microarray data. However, I got this error. Would you please have a suggestion? gsa = egsea.ma(numeric…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
> Any suggestions for methylation data segmentation? I think the same segmentation can be used.
Comment: deseq2 results
by
swbarnes2
★ 1.3k
Cross-posted https://www.biostars.org/p/9594331/#9594458
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A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
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